Miyakogusa Predicted Gene

Lj0g3v0326889.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1KDW3_SOYBN 248 80.6 91.7 (tr|I1KDW3) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G53035.1 199 64.6 82.6 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:19761866-19762318 REVERSE LENGTH=150

Medicago Medtr1g092420.2 221 72.2 84.7 | transmembrane protein, putative | HC | chr1:41412161-41413295 | 20130731

Soybean Glyma06g37230.1 248 80.6 91.7

LJGI gnl|LJGI|TC67867 841 99.3 99.3 similar to UniRef100_A7R4Q0 Cluster: Chromosome undetermined scaffold_754, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_754, whole genome shotgun sequence - Vitis vinifera (Grape), partial (95%)

Putative transmembrane regions

From To

TM segments
SOSUI 3 25

59 80

85 107

119 140

Wolf-PSORT

Lj0g3v0326889.1 plas 4, extr 3, vacu 3, golg_plas 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0326889.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1KDW3_SOYBN	248	80.6	91.7	(tr\|I1KDW3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G53035.1	199	64.6	82.6	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:19761866-19762318 REVERSE LENGTH=150
Medicago	Medtr1g092420.2	221	72.2	84.7	\| transmembrane protein, putative \| HC \| chr1:41412161-41413295 \| 20130731
Soybean	Glyma06g37230.1	248	80.6	91.7
LJGI	gnl\|LJGI\|TC67867	841	99.3	99.3	similar to UniRef100_A7R4Q0 Cluster: Chromosome undetermined scaffold_754, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_754, whole genome shotgun sequence - Vitis vinifera (Grape), partial (95%)