Miyakogusa Predicted Gene

Lj0g3v0326709.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L149_SOYBN 1369 61.8 68.5 (tr|K7L149) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G60240.4 645 58.6 71.3 | Symbols: EIF4G, CUM2 | eukaryotic translation initiation factor 4G | chr3:22261842-22268295 FORWARD LENGTH=1727
Medicago Medtr8g008680.3 1271 58.3 66.3 | eukaryotic translation initiation factor 4G-like protein | HC | chr8:1821431-1811144 | 20130731
Soybean Glyma07g13380.1 1342 59.3 65.6  
LJGI gnl|LJGI|DC598357 983 99.2 99.2 weakly similar to UniRef100_A9UFY5 Cluster: Truncated eukaryotic initiation translation factor 4 G III; n=1; Medicago sativa|Rep: Truncated eukaryotic initiation translation factor 4 G III - Medicago sativa (Alfalfa), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0326709.2 length: 1181 aa.
IPR003890 MIF4G-like, type 3
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0005515 protein binding    
HMMPfam PF02854 MIF4G 3.6e-56 933-1155
HMMSmart SM00543 Middle 1.6e-50 933-1155
IPR016021 MIF4-like, type 1/2/3
Biological Process GO:0016070 RNA metabolic process    
Gene3D G3DSA:1.25.40.180 no description 4.5e-83 933-1172
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.4e-71 922-1158
no_ID  
Coil coil coiled-coil NA 1015-1036
HMMPanther PTHR23253 EUKARYOTIC 4.2e-297 132-1181
HMMPanther PTHR23253:SF7 EUKARYOTIC 4.2e-297 132-1181
Seg seg seg NA 138-145
277-289
368-376
407-427
478-496
599-619
1019-1031
1045-1057
Wolf-PSORT
Lj0g3v0326709.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0326709.2