Miyakogusa Predicted Gene

Lj0g3v0326569.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SGI7_LOTJA 191 100.0 100.0 (tr|I3SGI7) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1

TAIR_pep AT1G21930.1 134 78.0 87.8 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7713466-7714298 FORWARD LENGTH=98

Medicago Medtr5g059050.1 167 93.1 95.4 | transmembrane protein, putative | HC | chr5:24365493-24366999 | 20130731

Soybean Glyma14g33150.1 167 91.2 93.4

LJGI gnl|LJGI|TC60830 565 100.0 100.0 similar to UniRef100_A7PC42 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%)

Putative transmembrane regions

From To

TM segments
SOSUI 14 35

Wolf-PSORT

Lj0g3v0326569.1 plas 4, chlo 3, nucl 3, cyto 1, mito 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0326569.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SGI7_LOTJA	191	100.0	100.0	(tr\|I3SGI7) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep	AT1G21930.1	134	78.0	87.8	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:7713466-7714298 FORWARD LENGTH=98
Medicago	Medtr5g059050.1	167	93.1	95.4	\| transmembrane protein, putative \| HC \| chr5:24365493-24366999 \| 20130731
Soybean	Glyma14g33150.1	167	91.2	93.4
LJGI	gnl\|LJGI\|TC60830	565	100.0	100.0	similar to UniRef100_A7PC42 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%)