Miyakogusa Predicted Gene
- Lj0g3v0325979.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MZV2_SOYBN |
194 |
90.2 |
94.1 |
(tr|I1MZV2) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G30170.1 |
149 |
67.7 |
88.9 |
| Symbols: | Protein phosphatase 2C family protein | chr2:12879802-12881474 REVERSE LENGTH=298 |
| Medicago |
Medtr3g031360.1 |
152 |
80.4 |
91.2 |
| protein phosphatase 2C family protein | HC | chr3:26807600-26811666 | 20130731 |
| Soybean |
Glyma18g06480.1 |
192 |
89.2 |
93.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0325979.1 |
length: 150 aa. |
| IPR001932 |
Protein phosphatase 2C (PP2C)-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.60.40.10 |
no description |
1.8e-10 |
133-145 |
| superfamily |
SSF81606 |
PP2C-like |
1.7e-10 |
49-147 |
| no_ID |
|
| HMMPanther |
PTHR12320 |
PROTEIN |
7.3e-27 |
48-148 |
| HMMPanther |
PTHR12320:SF0 |
SUBFAMILY |
7.3e-27 |
48-148 |
- Wolf-PSORT
Lj0g3v0325979.1 cyto 5, chlo 3, plas 2, vacu 2, extr 1, golg 1, nucl_plas 1, E.R._vacu 1, cysk_plas 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0325979.1 |
|