Miyakogusa Predicted Gene

Lj0g3v0325829.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MJM3_SOYBN 607 72.5 78.0 (tr|I1MJM3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G52120.1 456 54.9 64.8 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | chr3:19329243-19331738 FORWARD LENGTH=443
Medicago Medtr8g036890.1 538 64.8 71.7 | suppressor-of-white-APricot splicing regulator | HC | chr8:13445831-13440568 | 20130731
Soybean Glyma15g42690.1 607 72.5 78.0  
LJGI gnl|LJGI|AV407318 674 100.0 100.0 similar to UniRef100_A7QWV9 Cluster: Chromosome chr13 scaffold_210, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_210, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0325829.2 length: 437 aa.
IPR000061 SWAP/Surp
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006396 RNA processing    
HMMPfam PF01805 Surp 8.8e-14 146-197
HMMSmart SM00648 Suppressor-of-White-APricot 1.1e-13 146-200
ProfileScan PS50128 SURP 13.062 148-191
superfamily SSF109905 Surp 3.6e-16 119-206
IPR000467 G-patch domain
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01585 G-patch 6e-13 355-398
HMMSmart SM00443 glycine 8.7e-14 352-399
ProfileScan PS50174 G_PATCH 16.990 354-401
no_ID  
HMMPanther PTHR23340 ARGININE/SERINE 5.1e-86 76-437
HMMPanther PTHR23340:SF0 SUBFAMILY 5.1e-86 76-437
Seg seg seg NA 45-55
97-109
133-148
337-354
Wolf-PSORT
Lj0g3v0325829.2	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0325829.2