Miyakogusa Predicted Gene
- Lj0g3v0325259.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SXA9_LOTJA |
408 |
90.3 |
90.8 |
(tr|I3SXA9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G26140.1 |
71.2 |
31.7 |
50.3 |
| Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-11135126 REVERSE LENGTH=717 |
| Medicago |
Medtr5g075360.2 |
79.3 |
35.1 |
50.0 |
| ATP-dependent zinc metalloprotease FTSH protein | HC | chr5:32020731-32026290 | 20130731 |
| Soybean |
Glyma06g13140.1 |
73.9 |
33.1 |
51.0 |
|
| LJGI |
gnl|LJGI|TC65958 |
1281 |
100.0 |
100.0 |
similar to UniRef100_A9HYU7 Cluster: Cell division protein FtsH; n=1; Bordetella petrii|Rep: Cell division protein FtsH - Bordetella petrii, partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0325259.1 |
length: 224 aa. |
| IPR000642 |
Peptidase M41 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004222 |
metalloendopeptidase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006508 |
proteolysis |
|
|
| HMMPfam |
PF01434 |
Peptidase_M41 |
5.7e-32 |
41-210 |
| no_ID |
|
| HMMPanther |
PTHR23076 |
METALLOPROTEASE |
4.5e-34 |
41-218 |
| Seg |
seg |
seg |
NA |
186-204 |
| superfamily |
SSF140990 |
FtsH |
1.1e-34 |
32-214 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
204 |
223 |
- Wolf-PSORT
Lj0g3v0325259.1 cyto 7, E.R. 2, golg 2, chlo 1, nucl 1, vacu 1, golg_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0325259.1 |
|