Miyakogusa Predicted Gene

Lj0g3v0325249.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SXA9_LOTJA 537 93.1 93.1 (tr|I3SXA9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT2G26140.1 71.6 31.7 50.3 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-11135126 REVERSE LENGTH=717

Medicago Medtr5g075360.2 79.0 35.1 50.0 | ATP-dependent zinc metalloprotease FTSH protein | HC | chr5:32020731-32026290 | 20130731

Soybean Glyma06g13140.1 74.3 32.4 50.3

LJGI gnl|LJGI|TC65958 1731 100.0 100.0 similar to UniRef100_A9HYU7 Cluster: Cell division protein FtsH; n=1; Bordetella petrii|Rep: Cell division protein FtsH - Bordetella petrii, partial (5%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0325249.2 length: 289 aa.

IPR000642 Peptidase M41

method AccNumber shortName E-value location

Molecular Function GO:0004222 metalloendopeptidase activity

Molecular Function GO:0005524 ATP binding

Biological Process GO:0006508 proteolysis

HMMPfam PF01434 Peptidase_M41 1.2e-31 105-274

no_ID

HMMPanther PTHR23076 METALLOPROTEASE 5.8e-34 105-277

Seg seg seg NA 1-12
250-268

superfamily SSF140990 FtsH 1.1e-34 96-278

Wolf-PSORT

Lj0g3v0325249.2 chlo 7, mito 5, cyto 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0325249.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SXA9_LOTJA	537	93.1	93.1	(tr\|I3SXA9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT2G26140.1	71.6	31.7	50.3	\| Symbols: ftsh4 \| FTSH protease 4 \| chr2:11131939-11135126 REVERSE LENGTH=717
Medicago	Medtr5g075360.2	79.0	35.1	50.0	\| ATP-dependent zinc metalloprotease FTSH protein \| HC \| chr5:32020731-32026290 \| 20130731
Soybean	Glyma06g13140.1	74.3	32.4	50.3
LJGI	gnl\|LJGI\|TC65958	1731	100.0	100.0	similar to UniRef100_A9HYU7 Cluster: Cell division protein FtsH; n=1; Bordetella petrii\|Rep: Cell division protein FtsH - Bordetella petrii, partial (5%)

IPR000642	Peptidase M41
Lj0g3v0325249.2				length: 289 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0004222	metalloendopeptidase activity
Molecular Function	GO:0005524	ATP binding
Biological Process	GO:0006508	proteolysis
HMMPfam	PF01434	Peptidase_M41	1.2e-31	105-274
no_ID
HMMPanther	PTHR23076	METALLOPROTEASE	5.8e-34	105-277
Seg	seg	seg	NA	1-12 250-268
superfamily	SSF140990	FtsH	1.1e-34	96-278