Miyakogusa Predicted Gene

Lj0g3v0324609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M0R4_SOYBN 993 78.6 89.1 (tr|K7M0R4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G38730.1 682 56.1 74.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15510901-15512691 FORWARD LENGTH=596
Medicago Medtr8g039270.1 946 76.1 86.2 | PPR containing plant-like protein | HC | chr8:14611328-14608322 | 20130731
Soybean Glyma15g37780.1 993 79.1 89.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0324609.1 length: 588 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.025 476-505
510-539
HMMPfam PF13041 PPR_2 1.6e-15 229-277
297-346
369-416
HMMPfam PF13812 PPR_3 2.6e-08 135-159
198-229
HMMTigr TIGR00756 PPR: 0.0003 197-231
232-265
267-294
300-333
336-368
370-403
405-438
476-508
ProfileScan PS51375 PPR 8.857 73-107
125-159
195-229
160-194
230-264
265-295
298-332
333-367
368-402
403-437
473-507
438-472
508-542
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.8e-08 505-533
no_ID  
HMMPanther PTHR24015 FAMILY 1.4e-122 79-548
Seg seg seg NA 106-116
superfamily SSF48452 TPR-like 0.016 230-397
473-534
Wolf-PSORT
Lj0g3v0324609.1	cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0324609.1