Miyakogusa Predicted Gene

Lj0g3v0324189.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL H8WVC7_LOTJA 356 100.0 100.0 (tr|H8WVC7) E3 ubiquitin ligase-like protein (Fragment) OS=Lotus japonicus GN=SINA5 PE=2 SV=1
TAIR_pep AT3G58040.1 301 81.5 91.1 | Symbols: SINAT2 | seven in absentia of Arabidopsis 2 | chr3:21489612-21491085 FORWARD LENGTH=308
Medicago Medtr1g054335.1 296 82.7 89.9 | ubiquitin ligase SINAT3 | HC | chr1:23400280-23404620 | 20130731
Soybean Glyma19g33170.2 300 81.5 90.5  
LJGI gnl|LJGI|BP053570 349 96.2 96.2 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n=1; Vitis vinifera|Rep: SINA2p - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0324189.2 length: 169 aa.
IPR004162 Seven-in-absentia protein, sina
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Biological Process GO:0007275 multicellular organismal development    
HMMPanther PTHR10315 SEVEN 1.8e-54 1-169
IPR008974 TRAF-like
Molecular Function GO:0005515 protein binding    
superfamily SSF49599 TRAF 1.7e-31 4-169
IPR013010 Zinc finger, SIAH-type
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS51081 ZF_SIAH 10.064 1-40
IPR013323 SIAH-type domain
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Molecular Function GO:0008270 zinc ion binding    
Biological Process GO:0016567 protein ubiquitination    
Gene3D G3DSA:3.90.890.10 no description 1.8e-09 2-35
IPR018121 Seven-in-absentia protein, TRAF-like domain
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Biological Process GO:0007275 multicellular organismal development    
HMMPfam PF03145 Sina 6.7e-55 2-168
no_ID  
Gene3D G3DSA:2.60.210.10 no description 8.7e-47 45-169
Wolf-PSORT
Lj0g3v0324189.2	cyto 6, nucl 4, mito 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0324189.2