Miyakogusa Predicted Gene

Lj0g3v0323809.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MJW3_SOYBN 509 67.4 76.6 (tr|K7MJW3) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G47000.1 376 50.1 65.4 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding cassette subfamily B4 | chr2:19310008-19314750 REVERSE LENGTH=1286
Medicago Medtr4g124050.3 508 68.7 75.4 | transporter ABC domain protein | HC | chr4:51210003-51216982 | 20130731
Soybean Glyma17g04610.1 468 64.0 72.1  
LJGI gnl|LJGI|FS361887 111 84.0 84.0 similar to UniRef100_A7Q0Z8 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0323809.2 length: 388 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 6.7e-25 210-381
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.5e-10 6-37
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 1.4e-34 189-382
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 28.357 213-382
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.1e-32 1-104
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 3.4e-30 198-381
Gene3D G3DSA:3.40.50.300 no description 1.1e-37 2-118
HMMPanther PTHR24222 FAMILY 9.7e-189 1-384
HMMPanther PTHR24222:SF3 SUBFAMILY 9.7e-189 1-384
Seg seg seg NA 143-158
214-230
353-366
Putative transmembrane regions
  From To
TM segments
SOSUI		 213 235
247 269
321 343
351 373
Wolf-PSORT
Lj0g3v0323809.2	plas 3.5, E.R. 3, cyto_plas 2.5, vacu 2, golg 2, chlo 1, mito 1, pero 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0323809.2