Miyakogusa Predicted Gene

Lj0g3v0323399.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KRZ1_SOYBN 458 64.7 70.9 (tr|I1KRZ1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G04620.1 419 60.9 67.3 | Symbols: | Cation efflux family protein | chr2:1610506-1612902 REVERSE LENGTH=798
Medicago Medtr6g463330.1 501 67.9 76.1 | cation diffusion facilitator family transporter | HC | chr6:21913825-21916862 | 20130731
Soybean Glyma08g10750.1 458 64.7 70.9  
LJGI gnl|LJGI|TC67333 690 100.0 100.0 similar to UniRef100_A7PMH0 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0323399.1 length: 899 aa.
IPR002524 Cation efflux protein
method AccNumber shortName E-value location
Biological Process GO:0006812 cation transport    
Molecular Function GO:0008324 cation transmembrane transporter activity    
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPanther PTHR11562 CATION 4.6e-100 380-896
HMMPfam PF01545 Cation_efflux 8.2e-60 402-898
HMMTigr TIGR01297 CDF: 5e-37 397-528
747-896
IPR027469 Cation efflux protein transmembrane domain
Gene3D G3DSA:1.20.1510.10 no description 1.2e-53 750-818
no_ID  
HMMPanther PTHR11562:SF10 SUBFAMILY 4.6e-100 380-896
Seg seg seg NA 27-47
52-114
185-199
250-265
341-353
501-519
525-570
614-646
663-695
705-741
795-807
Putative transmembrane regions
  From To
TM segments
SOSUI		 64 86
88 109
152 173
182 201
218 240
253 275
284 306
330 352
400 422
427 449
471 493
500 521
760 782
788 810
Wolf-PSORT
Lj0g3v0323399.1	plas 8, chlo 3, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0323399.1