Miyakogusa Predicted Gene

Lj0g3v0322249.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MCZ5_SOYBN 568 75.2 80.4 (tr|K7MCZ5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G79380.1 466 62.7 74.5 | Symbols: | Ca(2)-dependent phospholipid-binding protein (Copine) family | chr1:29860812-29863023 FORWARD LENGTH=401
Medicago Medtr8g447220.1 561 74.9 82.0 | calcium-dependent phospholipid-binding copine family protein | HC | chr8:18538541-18545058 | 20130731
Soybean Glyma15g32010.2 569 75.2 80.4  
LJGI gnl|LJGI|TC61685 2192 99.9 99.9 similar to UniRef100_Q6YYC5 Cluster: Copine I-like protein; n=1; Oryza sativa Japonica Group|Rep: Copine I-like protein - Oryza sativa subsp. japonica (Rice), partial (77%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0322249.1 length: 368 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 9.686 323-356
IPR002035 von Willebrand factor, type A
Molecular Function GO:0005515 protein binding    
HMMSmart SM00327 von 3.2e-07 40-243
IPR010734 Copine
HMMPfam PF07002 Copine 1.4e-51 65-213
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.1e-06 307-362
no_ID  
HMMPanther PTHR10857 COPINE 1e-136 15-304
HMMPfam PF13920 zf-C3HC4_3 8.5e-08 321-361
Seg seg seg NA 242-265
289-302
superfamily SSF53300 vWA-like 2.8e-11 36-224
superfamily SSF57850 RING/U-box 7.2e-07 315-368
Wolf-PSORT
Lj0g3v0322249.1	chlo 7, nucl 3, cyto 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0322249.1