Miyakogusa Predicted Gene

Lj0g3v0321809.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LG12_SOYBN 726 83.4 89.9 (tr|I1LG12) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G52640.1 517 59.9 78.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:19608857-19610428 REVERSE LENGTH=523
Medicago Medtr8g102710.1 691 80.0 88.7 | PPR containing plant-like protein | HC | chr8:43240632-43242952 | 20130731
Soybean Glyma11g01360.1 697 85.1 91.3  
LJGI gnl|LJGI|FS334701 692 99.4 99.4 similar to UniRef100_A7QIR8 Cluster: Chromosome chr9 scaffold_104, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_104, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0321809.1 length: 419 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 1e-05 156-181
221-250
HMMPfam PF13041 PPR_2 2.6e-16 255-301
322-364
HMMPfam PF13812 PPR_3 0.1 395-418
HMMTigr TIGR00756 PPR: 0.0021 221-253
256-289
290-324
325-359
395-418
ProfileScan PS51375 PPR 8.988 113-147
149-183
218-252
184-214
253-287
288-322
323-357
358-392
393-419
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.7e-06 390-418
no_ID  
HMMPanther PTHR24015 FAMILY 4.2e-96 47-418
HMMPanther PTHR24015:SF0 SUBFAMILY 4.2e-96 47-418
Wolf-PSORT
Lj0g3v0321809.1	mito 6, chlo 5, cyto_mito 4.5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0321809.1