Miyakogusa Predicted Gene

Lj0g3v0321799.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1ND04_SOYBN 842 54.0 63.9 (tr|I1ND04) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G20970.1 289 42.9 63.0 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:7314338-7319246 FORWARD LENGTH=1364
Medicago Medtr1g035040.1 696 50.6 63.1 | transmembrane protein, putative | HC | chr1:12676634-12682485 | 20130731
Soybean Glyma20g00910.1 843 54.6 63.3  
LJGI gnl|LJGI|DC593951 1150 99.5 99.5 weakly similar to UniRef100_A7QPI8 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0321799.2 length: 1018 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 455-476
514-535
558-589
597-646
834-915
HMMPanther PTHR32219 FAMILY 1.5e-59 497-1009
HMMPanther PTHR32219:SF1 SUBFAMILY 1.5e-59 497-1009
Seg seg seg NA 30-43
242-257
562-573
620-631
803-819
844-863
881-916
990-1003
Putative transmembrane regions
  From To
TM segments
SOSUI		 985 1007
Wolf-PSORT
Lj0g3v0321799.2	nucl 6, plas 2.5, vacu 2, E.R._plas 2, cyto 1.5, cyto_pero 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0321799.2