Miyakogusa Predicted Gene

Lj0g3v0321769.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1ND03_SOYBN 1390 69.3 76.5 (tr|I1ND03) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G20980.1 829 46.9 60.8 | Symbols: SPL14, FBR6, SPL1R2, ATSPL14 | squamosa promoter binding protein-like 14 | chr1:7325042-7328933 FORWARD LENGTH=1035
Medicago Medtr1g035010.1 1371 68.1 76.7 | squamosa promoter-binding-like protein | HC | chr1:12692334-12698670 | 20130731
Soybean Glyma20g00900.1 1390 69.3 76.5  
LJGI gnl|LJGI|TC68896 607 93.0 93.0 similar to UniRef100_A7QPJ0 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0321769.1 length: 1023 aa.
IPR004333 Transcription factor, SBP-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Gene3D G3DSA:4.10.1100.10 no description 2.8e-32 98-165
HMMPfam PF03110 SBP 7.7e-38 103-180
ProfileScan PS51141 ZF_SBP 31.658 101-178
superfamily SSF103612 SBT 7.3e-38 101-186
no_ID  
HMMPanther PTHR31251 FAMILY 5.7e-232 88-1023
HMMPanther PTHR31251:SF0 SUBFAMILY 5.7e-232 88-1023
Seg seg seg NA 67-86
165-176
183-196
286-304
472-485
989-999
Putative transmembrane regions
  From To
TM segments
SOSUI		 982 1004
Wolf-PSORT
Lj0g3v0321769.1	nucl 8, vacu 2, golg 2, mito 1, plas 1, E.R._vacu 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0321769.1