Miyakogusa Predicted Gene

Lj0g3v0321629.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K4CAK8_SOLLC 338 71.7 85.4 (tr|K4CAK8) Uncharacterized protein OS=Solanum lycopersicum GN=Solyc06g083530.2 PE=4 SV=1
TAIR_pep AT1G04760.1 319 70.8 83.6 | Symbols: ATVAMP726, VAMP726 | vesicle-associated membrane protein 726 | chr1:1334760-1336070 FORWARD LENGTH=220
Medicago Medtr7g058640.1 331 80.5 89.2 | synaptobrevin-like protein | HC | chr7:21214758-21216356 | 20130731
Soybean Glyma18g37970.2 332 80.0 89.2  
LJGI gnl|LJGI|AV417281 650 100.0 100.0 similar to UniRef100_A7QTI2 Cluster: Chromosome undetermined scaffold_168, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_168, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0321629.1 length: 221 aa.
IPR001388 Synaptobrevin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0016192 vesicle-mediated transport    
FPrintScan PR00219 SYNAPTOBREVN 1.1e-14 135-154
155-174
191-210
HMMPfam PF00957 Synaptobrevin 1.6e-29 130-214
ProfileScan PS50892 V_SNARE 15.927 130-190
IPR010908 Longin domain
Gene3D G3DSA:3.30.450.50 no description 1.2e-41 4-109
HMMPfam PF13774 Longin 2e-22 32-111
ProfileScan PS50859 LONGIN 27.237 10-114
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 8.1e-29 5-122
no_ID  
Gene3D G3DSA:1.10.3840.10 no description 1.3e-40 110-214
HMMPanther PTHR21136 SNARE 7.9e-105 3-216
HMMPanther PTHR21136:SF8 VAMP-7 7.9e-105 3-216
Putative transmembrane regions
  From To
TM segments
SOSUI		 195 217
Wolf-PSORT
Lj0g3v0321629.1	cyto 7, chlo 2, nucl 1, mito 1, plas 1, vacu 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0321629.1