Miyakogusa Predicted Gene

Lj0g3v0321149.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JSX5_MEDTR 356 52.3 64.4 (tr|G7JSX5) F-box family protein OS=Medicago truncatula GN=MTR_4g050930 PE=4 SV=1
TAIR_pep AT1G78760.1 88.6 29.0 46.3 | Symbols: | F-box/RNI-like superfamily protein | chr1:29615174-29616738 REVERSE LENGTH=452
Medicago Medtr4g050930.1 356 52.3 64.4 | F-box/RNI superfamily protein | HC | chr4:36591608-36584820 | 20130731
Soybean Glyma06g10300.1 346 53.1 64.4  
LJGI gnl|LJGI|BP063614 856 100.0 100.0 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago truncatula|Rep: Cyclin-like F-box - Medicago truncatula (Barrel medic), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0321149.1 length: 416 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 3.2e-05 32-71
superfamily SSF81383 F-box 3.3e-10 28-100
no_ID  
Gene3D G3DSA:3.80.10.10 no description 7.6e-13 27-323
HMMPanther PTHR32212 FAMILY 4.7e-25 11-327
Seg seg seg NA 270-282
322-346
367-378
Putative transmembrane regions
  From To
TM segments
SOSUI		 287 309
Wolf-PSORT
Lj0g3v0321149.1	nucl 7, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0321149.1