Miyakogusa Predicted Gene

Lj0g3v0320939.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LQS9_SOYBN 545 75.8 85.4 (tr|K7LQS9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G44950.1 407 55.1 73.6 | Symbols: RDO4, HUB1 | histone mono-ubiquitination 1 | chr2:18542602-18548247 REVERSE LENGTH=878
Medicago Medtr7g046250.1 543 75.0 84.3 | E3 ubiquitin-protein ligase BRE1-like protein | HC | chr7:16333806-16352752 | 20130731
Soybean Glyma01g13430.1 547 76.3 85.2  
LJGI gnl|LJGI|TC72281 2107 99.7 99.7 weakly similar to UniRef100_A7PKF0 Cluster: Chromosome chr15 scaffold_19, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_19, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0320939.1 length: 358 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 6e-07 306-344
ProfileScan PS50089 ZF_RING_2 11.412 306-344
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 5.3e-16 290-357
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 321-330
no_ID  
Coil coil coiled-coil NA 60-109
186-207
249-284
HMMPanther PTHR23163 RING 2.3e-83 1-358
HMMPanther PTHR23163:SF0 SUBFAMILY 2.3e-83 1-358
HMMPfam PF13920 zf-C3HC4_3 3e-08 305-347
Seg seg seg NA 254-271
superfamily SSF57850 RING/U-box 1.2e-13 301-358
Wolf-PSORT
Lj0g3v0320939.1	nucl 11, cyto 1, pero 1, cysk 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0320939.1