Miyakogusa Predicted Gene
- Lj0g3v0320209.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0320209.1 |
length: 173 aa. |
IPR002318 |
Alanine-tRNA ligase, class IIc |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
Cellular Component |
GO:0005737 |
cytoplasm |
|
|
HMMPanther |
PTHR11777:SF6 |
SUBFAMILY |
1.2e-59 |
1-173 |
IPR018162 |
Alanine-tRNA ligase, class IIc, anti-codon-binding domain |
Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
Molecular Function |
GO:0004813 |
alanine-tRNA ligase activity |
|
|
Molecular Function |
GO:0005524 |
ATP binding |
|
|
Cellular Component |
GO:0005737 |
cytoplasm |
|
|
Biological Process |
GO:0006419 |
alanyl-tRNA aminoacylation |
|
|
superfamily |
SSF101353 |
Putative |
1e-27 |
1-132 |
IPR018164 |
Alanyl-tRNA synthetase, class IIc, N-terminal |
Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
Molecular Function |
GO:0004813 |
alanine-tRNA ligase activity |
|
|
Molecular Function |
GO:0005524 |
ATP binding |
|
|
Cellular Component |
GO:0005737 |
cytoplasm |
|
|
Biological Process |
GO:0006419 |
alanyl-tRNA aminoacylation |
|
|
HMMPfam |
PF01411 |
tRNA-synt_2c |
1.7e-41 |
1-173 |
IPR018165 |
Alanyl-tRNA synthetase, class IIc, core domain |
Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
Molecular Function |
GO:0004813 |
alanine-tRNA ligase activity |
|
|
Molecular Function |
GO:0005524 |
ATP binding |
|
|
Cellular Component |
GO:0005737 |
cytoplasm |
|
|
Biological Process |
GO:0006419 |
alanyl-tRNA aminoacylation |
|
|
ProfileScan |
PS50860 |
AA_TRNA_LIGASE_II_ALA |
18.333 |
1-173 |
no_ID |
|
HMMPanther |
PTHR11777 |
ALANYL-TRNA |
1.2e-59 |
1-173 |
- Wolf-PSORT
Lj0g3v0320209.1 cyto 7, pero 3, nucl 2, chlo 1, mito 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0320209.1 |
|