Miyakogusa Predicted Gene
- Lj0g3v0318859.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KQ26_MEDTR |
279 |
82.0 |
87.6 |
(tr|G7KQ26) Double-stranded RNA-specific adenosine deaminase OS=Medicago truncatula GN=MTR_6g031060 PE=4 SV=1 |
| TAIR_pep |
AT1G01760.1 |
201 |
60.0 |
75.6 |
| Symbols: | adenosine deaminases;RNA binding;RNA binding;adenosine deaminases | chr1:276412-278448 REVERSE LENGTH=420 |
| Medicago |
Medtr8g031440.1 |
279 |
82.0 |
87.6 |
| tRNA-specific adenosine deaminase | HC | chr8:11790899-11796969 | 20130731 |
| Soybean |
Glyma07g07990.1 |
273 |
80.7 |
88.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0318859.1 |
length: 165 aa. |
| IPR002466 |
Adenosine deaminase/editase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003723 |
RNA binding |
|
|
| Molecular Function |
GO:0004000 |
adenosine deaminase activity |
|
|
| Biological Process |
GO:0006396 |
RNA processing |
|
|
| HMMPfam |
PF02137 |
A_deamin |
9e-25 |
8-156 |
| ProfileScan |
PS50141 |
A_DEAMIN_EDITASE |
14.386 |
9-161 |
| no_ID |
|
| HMMPanther |
PTHR10910 |
EUKARYOTE |
4.8e-40 |
9-165 |
| HMMPanther |
PTHR10910:SF16 |
RNA |
4.8e-40 |
9-165 |
- Wolf-PSORT
Lj0g3v0318859.1 mito 5, nucl 4, cyto 2, extr 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0318859.1 |
|