Miyakogusa Predicted Gene

Lj0g3v0318709.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KS47_SOYBN 172 71.8 80.3 (tr|I1KS47) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G47320.1 107 74.3 83.8 | Symbols: RPS19 | ribosomal protein S19 | chr5:19203801-19204951 FORWARD LENGTH=212
Medicago Medtr7g106780.1 157 66.9 73.7 | ribosomal protein S19 | HC | chr7:43489713-43490649 | 20130731
Soybean Glyma08g11250.1 172 71.8 80.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0318709.1 length: 125 aa.
IPR002222 Ribosomal protein S19/S15
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
FPrintScan PR00975 RIBOSOMALS19 3.1e-14 60-79
80-92
92-107
HAMAP MF_00531 Ribosomal_S19 17.868 6-118
HMMPIR PIRSF002144 Ribosomal 3.8e-24 24-124
HMMPanther PTHR11880 RIBOSOMAL 3.4e-23 60-108
HMMPfam PF00203 Ribosomal_S19 1.9e-25 36-108
IPR020934 Ribosomal protein S19 conserved site
Molecular Function GO:0003723 RNA binding    
PatternScan PS00323 RIBOSOMAL_S19 NA 80-104
IPR023575 Ribosomal protein S19, superfamily
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Gene3D G3DSA:3.30.860.10 no description 3.3e-25 36-117
superfamily SSF54570 Ribosomal 3.6e-20 32-112
no_ID  
Seg seg seg NA 26-39
116-125
Wolf-PSORT
Lj0g3v0318709.1	chlo 8, cyto 2, nucl 1, mito 1, extr 1, pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0318709.1