Miyakogusa Predicted Gene

Lj0g3v0318659.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7L7Q4_MEDTR 1305 71.4 81.7 (tr|G7L7Q4) Calcium-transporting ATPase 4, plasma membrane-type OS=Medicago truncatula GN=MTR_8g045070 PE=3 SV=1
TAIR_pep AT3G57330.1 1169 59.8 75.7 | Symbols: ACA11 | autoinhibited Ca2+-ATPase 11 | chr3:21211655-21216375 REVERSE LENGTH=1025
Medicago Medtr8g446010.1 1363 73.5 84.1 | calcium-transporting ATPase | LC | chr8:17579887-17584698 | 20130731
Soybean Glyma03g29010.1 1277 64.6 78.8  
LJGI gnl|LJGI|TC78106 174 79.1 79.1 similar to UniRef100_Q93YX7 Cluster: Type IIB calcium ATPase; n=1; Medicago truncatula|Rep: Type IIB calcium ATPase - Medicago truncatula (Barrel medic), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0318659.1 length: 1020 aa.
IPR001757 Cation-transporting P-type ATPase
method AccNumber shortName E-value location
Biological Process GO:0006812 cation transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0019829 cation-transporting ATPase activity    
FPrintScan PR00119 CATATPASE 6.3e-31 276-290
445-459
643-654
665-675
746-765
770-782
FPrintScan PR00120 HATPASE 1.7e-12 603-621
746-762
778-803
HMMPanther PTHR24093 FAMILY 0 19-966
HMMTigr TIGR01494 ATPase_P-type: 5.4e-27 200-467
717-834
IPR004014 Cation-transporting P-type ATPase, N-terminal
HMMPfam PF00690 Cation_ATPase_N 2.8e-11 113-176
IPR006068 Cation-transporting P-type ATPase, C-terminal
HMMPfam PF00689 Cation_ATPase_C 9.1e-31 831-965
IPR006408 Calcium-transporting P-type ATPase, subfamily IIB
Molecular Function GO:0005388 calcium-transporting ATPase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0016020 membrane    
Biological Process GO:0070588 calcium ion transmembrane transport    
HMMTigr TIGR01517 ATPase-IIB_Ca: 8.1e-298 105-966
IPR008250 P-type ATPase, A domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0046872 metal ion binding    
HMMPfam PF00122 E1-E2_ATPase 4e-59 197-437
IPR018303 P-type ATPase, phosphorylation site
PatternScan PS00154 ATPASE_E1_E2 NA 447-453
IPR023214 HAD-like domain
HMMPfam PF00702 Hydrolase 4e-20 444-760
superfamily SSF56784 HAD-like 9.2e-43 630-796
IPR023298 P-type ATPase, transmembrane domain
Gene3D G3DSA:1.20.1110.10 no description 2.3e-113 723-966
IPR023299 P-type ATPase, cytoplasmic domain N
Gene3D G3DSA:3.40.1110.10 no description 9.9e-45 435-650
superfamily SSF81660 Metal 8.8e-45 451-655
IPR024750 Calcium-transporting P-type ATPase, N-terminal autoinhibitory domain
Molecular Function GO:0005516 calmodulin binding    
HMMPfam PF12515 CaATP_NAI 1.6e-15 5-43
no_ID  
Coil coil coiled-coil NA 46-67
HMMPanther PTHR24093:SF0 SUBFAMILY 0 19-966
Seg seg seg NA 523-531
920-934
995-1011
superfamily SSF81653 Calcium 2.2e-25 227-327
superfamily SSF81665 Calcium 2.3e-85 113-966
Putative transmembrane regions
  From To
TM segments
SOSUI
157 179
191 213
345 367
395 417
518 539
801 823
833 855
881 903
941 963
Wolf-PSORT
Lj0g3v0318659.1	plas 10, golg 2, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0318659.1