Miyakogusa Predicted Gene
- Lj0g3v0318289.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7K347_SOYBN |
936 |
86.9 |
93.9 |
(tr|K7K347) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G37980.1 |
776 |
73.6 |
84.8 |
| Symbols: | O-fucosyltransferase family protein | chr2:15894162-15897452 REVERSE LENGTH=638 |
| Medicago |
Medtr4g019210.1 |
951 |
88.4 |
94.9 |
| GDP-fucose O-fucosyltransferase-like protein | HC | chr4:5969683-5964669 | 20130731 |
| Soybean |
Glyma01g27000.1 |
826 |
88.8 |
95.4 |
|
| LJGI |
gnl|LJGI|TC79735 |
1356 |
100.0 |
100.0 |
similar to UniRef100_A7PNZ1 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0318289.1 |
length: 505 aa. |
| IPR019378 |
GDP-fucose protein O-fucosyltransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF10250 |
O-FucT |
6.1e-94 |
100-417 |
| no_ID |
|
| HMMPanther |
PTHR31741 |
FAMILY |
1.1e-272 |
1-497 |
| HMMPanther |
PTHR31741:SF0 |
SUBFAMILY |
1.1e-272 |
1-497 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
20 |
- Wolf-PSORT
Lj0g3v0318289.1 chlo 4, nucl 2, cyto 2, plas 2, extr 2, cyto_nucl 2, nucl_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0318289.1 |
|