Miyakogusa Predicted Gene

Lj0g3v0317579.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J7L8_MEDTR 144 60.9 68.8 (tr|G7J7L8) Far upstream element-binding protein OS=Medicago truncatula GN=MTR_3g104270 PE=4 SV=1
TAIR_pep AT2G25970.1 118 52.3 62.1 | Symbols: | KH domain-containing protein | chr2:11071844-11075604 REVERSE LENGTH=632
Medicago Medtr1g016760.1 141 63.3 70.3 | RNA-binding KH domain protein | HC | chr1:4457792-4464676 | 20130731
Soybean Glyma06g05400.1 137 60.9 68.8  
LJGI gnl|LJGI|TC77869 165 84.6 84.6 similar to UniRef100_A7P4I3 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0317579.1 length: 149 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 2.5e-11 37-112
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 8.6e-14 41-106
ProfileScan PS50084 KH_TYPE_1 14.906 38-107
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 3.7e-15 41-111
HMMPanther PTHR10288 KH 4e-21 2-126
HMMPanther PTHR10288:SF57 FAR 4e-21 2-126
Seg seg seg NA 114-130
140-149
superfamily SSF54791 Eukaryotic 1.2e-13 41-111
Wolf-PSORT
Lj0g3v0317579.1	nucl 6, chlo 3, mito 3, chlo_mito 3, cysk_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0317579.1