Miyakogusa Predicted Gene
- Lj0g3v0317369.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KYF9_SOYBN |
525 |
81.9 |
91.4 |
(tr|I1KYF9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G50575.1 |
372 |
67.6 |
83.2 |
| Symbols: | Putative lysine decarboxylase family protein | chr1:18728862-18730296 REVERSE LENGTH=306 |
| Medicago |
Medtr3g055920.1 |
484 |
78.5 |
85.2 |
| lysine decarboxylase family protein | HC | chr3:22202867-22206617 | 20130731 |
| Soybean |
Glyma08g43700.1 |
525 |
81.9 |
91.4 |
|
| LJGI |
gnl|LJGI|TC64734 |
1806 |
99.9 |
99.9 |
similar to UniRef100_Q6F2U6 Cluster: Expressed protein; n=1; Oryza sativa Japonica Group|Rep: Expressed protein - Oryza sativa subsp. japonica (Rice), partial (66%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0317369.1 |
length: 303 aa. |
| IPR005269 |
Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03641 |
Lysine_decarbox |
5.6e-24 |
129-276 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.450 |
no description |
6.1e-32 |
88-278 |
| HMMPanther |
PTHR31208 |
FAMILY |
9.8e-92 |
62-302 |
| superfamily |
SSF102405 |
MoCo |
3.3e-32 |
80-281 |
- Wolf-PSORT
Lj0g3v0317369.1 nucl 6, cyto 4, chlo 2, cyto_pero 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0317369.1 |
|