Miyakogusa Predicted Gene

Lj0g3v0316669.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M5U2_SOYBN 1623 83.7 89.7 (tr|K7M5U2) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G58370.1 1300 67.1 80.5 | Symbols: RXF12, ATXYN1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:21684751-21688209 FORWARD LENGTH=917
Medicago Medtr1g017020.2 1601 82.0 88.3 | endo-1,4-beta-xylanase A-like protein | HC | chr1:4618914-4624370 | 20130731
Soybean Glyma17g35060.1 1612 82.8 89.2  
LJGI gnl|LJGI|TC67372 1419 100.0 100.0 similar to UniRef100_A7NUE8 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0316669.2 length: 928 aa.
IPR001000 Glycoside hydrolase, family 10
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00331 Glyco_hydro_10 2.3e-59 584-851
HMMSmart SM00633 Glycosyl 1.5e-10 622-872
IPR003305 Carbohydrate-binding, CenC-like
Molecular Function GO:0016798 hydrolase activity, acting on glycosyl bonds    
HMMPfam PF02018 CBM_4_9 3.3e-20 15-155
187-243
259-351
385-528
IPR008979 Galactose-binding domain-like
Gene3D G3DSA:2.60.120.260 no description 5.2e-28 11-172
185-243
259-371
385-542
superfamily SSF49785 Galactose-binding 1.6e-11 382-546
12-171
260-370
184-242
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 6.7e-89 569-902
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 1.9e-92 573-881
no_ID  
Coil coil coiled-coil NA 240-243
260-261
854-875
HMMPanther PTHR31490 FAMILY 2.9e-284 6-928
Seg seg seg NA 169-178
241-259
Wolf-PSORT
Lj0g3v0316669.2	nucl 8, cysk 2.5, cysk_plas 2.33333, mito_plas 1.33333, cyto 1, plas 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0316669.2