Miyakogusa Predicted Gene

Lj0g3v0316669.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M5U1_SOYBN 1635 82.0 87.8 (tr|K7M5U1) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G58370.1 1300 67.1 80.5 | Symbols: RXF12, ATXYN1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:21684751-21688209 FORWARD LENGTH=917
Medicago Medtr1g017020.2 1600 82.0 88.3 | endo-1,4-beta-xylanase A-like protein | HC | chr1:4618914-4624370 | 20130731
Soybean Glyma17g35060.1 1612 82.8 89.2  
LJGI gnl|LJGI|TC67372 1538 100.0 100.0 similar to UniRef100_A7NUE8 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0316669.1 length: 957 aa.
IPR001000 Glycoside hydrolase, family 10
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00331 Glyco_hydro_10 2.5e-59 613-880
HMMSmart SM00633 Glycosyl 1.5e-10 651-901
IPR003305 Carbohydrate-binding, CenC-like
Molecular Function GO:0016798 hydrolase activity, acting on glycosyl bonds    
HMMPfam PF02018 CBM_4_9 3.4e-20 44-184
216-272
288-380
414-557
IPR008979 Galactose-binding domain-like
Gene3D G3DSA:2.60.120.260 no description 5.5e-28 40-201
214-272
288-400
414-571
superfamily SSF49785 Galactose-binding 1.6e-11 411-575
41-200
289-399
213-271
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 7.2e-89 598-931
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 1.9e-92 602-910
no_ID  
Coil coil coiled-coil NA 269-272
289-290
883-904
HMMPanther PTHR31490 FAMILY 2.9e-284 35-957
Seg seg seg NA 9-28
198-207
270-288
Wolf-PSORT
Lj0g3v0316669.1	mito 6.5, chlo 5, cyto_mito 4, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0316669.1