Miyakogusa Predicted Gene

Lj0g3v0316139.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6T790_SOYBN 347 61.0 64.2 (tr|C6T790) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT1G73840.1 89.7 42.4 50.2 | Symbols: ESP1 | hydroxyproline-rich glycoprotein family protein | chr1:27763937-27766328 REVERSE LENGTH=388
Medicago Medtr8g104260.1 329 58.2 61.4 | hydroxyproline-rich glycoprotein-like protein | HC | chr8:43905814-43900142 | 20130731
Soybean Glyma10g04650.1 347 61.0 64.2  
LJGI gnl|LJGI|TC67428 2048 99.8 99.8 similar to UniRef100_O81698 Cluster: Proline-rich protein; n=1; Glycine max|Rep: Proline-rich protein - Glycine max (Soybean), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0316139.1 length: 345 aa.
IPR026896 Transcription termination and cleavage factor C-terminal domain
method AccNumber shortName E-value location
HMMPfam PF14304 CSTF_C 1.2e-08 311-345
no_ID  
HMMPanther PTHR23139 RNA-BINDING 1e-19 2-345
HMMPanther PTHR23139:SF13 CLEAVAGE 1e-19 2-345
Seg seg seg NA 15-34
40-51
110-126
129-142
165-177
228-240
Wolf-PSORT
Lj0g3v0316139.1	chlo 7, nucl 4, vacu 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0316139.1