Miyakogusa Predicted Gene

Lj0g3v0315349.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T286_LOTJA 285 87.0 87.0 (tr|I3T286) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G16260.1 211 65.2 74.5 | Symbols: ELF9 | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:5311363-5315496 FORWARD LENGTH=519
Medicago Medtr1g078210.1 244 72.6 79.9 | RNA recognition motif, a.k.a. RRM, RBD protein | HC | chr1:35008732-35001604 | 20130731
Soybean Glyma10g31450.1 263 79.0 84.0  
LJGI gnl|LJGI|TC70166 825 95.1 95.1 weakly similar to UniRef100_A9RHL7 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (73%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0315349.1 length: 162 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 4e-05 51-131
ProfileScan PS50102 RRM 9.712 74-135
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.3e-20 52-131
no_ID  
HMMPanther PTHR15608 SPLICING 3.5e-57 1-162
HMMPfam PF13893 RRM_5 2.1e-10 78-130
Seg seg seg NA 14-34
superfamily SSF54928 RNA-binding 6.1e-20 42-131
Wolf-PSORT
Lj0g3v0315349.1	chlo 5, nucl 4, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0315349.1