Miyakogusa Predicted Gene

Lj0g3v0314699.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KKV7_SOYBN 340 63.2 69.5 (tr|I1KKV7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G68070.1 281 52.9 62.4 | Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:25515412-25516767 REVERSE LENGTH=343
Medicago Medtr1g032440.1 329 63.4 67.9 | zinc finger (C3HC4-type RING finger) family protein | HC | chr1:11531767-11536322 | 20130731
Soybean Glyma07g26470.1 340 63.2 69.5  
LJGI gnl|LJGI|TC80085 529 98.9 98.9 similar to UniRef100_A7P3V3 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0314699.2 length: 264 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.2e-13 212-254
HMMSmart SM00184 Ring 1.6e-05 213-253
ProfileScan PS50089 ZF_RING_2 12.416 213-254
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 5.8e-16 209-257
no_ID  
HMMPanther PTHR11203 CLEAVAGE 4.4e-48 1-124
HMMPanther PTHR11203:SF8 INTEGRATOR 4.4e-48 1-124
Seg seg seg NA 37-49
53-74
116-129
133-152
superfamily SSF57850 RING/U-box 7e-21 186-260
Putative transmembrane regions
  From To
TM segments
SOSUI		 13 34
82 104
115 137
146 168
Wolf-PSORT
Lj0g3v0314699.2	chlo 5, cyto 3, plas 2, cyto_nucl 2, cyto_pero 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0314699.2