| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7L9I3_SOYBN | 798 | 85.7 | 92.8 | (tr|K7L9I3) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT1G23460.1 | 639 | 72.2 | 86.0 | | Symbols: | Pectin lyase-like superfamily protein | chr1:8327382-8329622 FORWARD LENGTH=460 |
| Medicago | Medtr8g065030.1 | 797 | 86.5 | 92.8 | | pectin lyase superfamily protein | HC | chr8:27313786-27310073 | 20130731 |
| Soybean | Glyma08g39330.1 | 798 | 85.7 | 92.8 | |
| LJGI | --No_Hits-- |
| Lj0g3v0314639.1 | length: 461 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 1e-100 | 92-414 |
| PatternScan | PS00502 | POLYGALACTURONASE | NA | 276-289 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 9.8e+02 | 219-245 246-267 269-289 328-349 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 2.1e-120 | 43-433 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 3.6e-135 | 62-443 |
| no_ID | ||||
| HMMPanther | PTHR31375 | FAMILY | 1.1e-180 | 1-451 |
| HMMPanther | PTHR31375:SF0 | SUBFAMILY | 1.1e-180 | 1-451 |
| Seg | seg | seg | NA | 4-17 |
| From | To | |
|---|---|---|
| TM segments SOSUI |
3 | 25 |
Lj0g3v0314639.1 cyto 3.5, cyto_nucl 3.5, extr 3, nucl 2.5, chlo 2, plas 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0314639.1 |