Miyakogusa Predicted Gene

Lj0g3v0314199.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J350_MEDTR 368 73.8 83.6 (tr|G7J350) E3 ubiquitin-protein ligase RGLG2 OS=Medicago truncatula GN=MTR_3g086520 PE=4 SV=1
TAIR_pep AT3G01650.1 317 64.5 76.4 | Symbols: RGLG1 | RING domain ligase1 | chr3:242734-245062 FORWARD LENGTH=489
Medicago Medtr3g086520.2 367 73.8 83.6 | E3 ubiquitin-protein ligase RGLG2-like protein | HC | chr3:39204814-39200567 | 20130731
Soybean Glyma18g01650.1 362 74.4 83.9  
LJGI gnl|LJGI|DC598835 97.6 79.6 79.6 similar to UniRef100_A7PM08 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0314199.1 length: 241 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 0.00028 198-230
ProfileScan PS50089 ZF_RING_2 10.852 198-231
IPR010734 Copine
HMMPfam PF07002 Copine 3e-16 2-62
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.3e-07 185-237
no_ID  
HMMPanther PTHR10857 COPINE 8.4e-67 1-143
HMMPfam PF13920 zf-C3HC4_3 6.1e-10 195-235
superfamily SSF57850 RING/U-box 9.6e-08 193-237
Wolf-PSORT
Lj0g3v0314199.1	cyto 5, cysk 5, nucl 2, chlo 1, golg 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0314199.1