Miyakogusa Predicted Gene
- Lj0g3v0313719.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KWS2_SOYBN |
871 |
72.5 |
83.9 |
(tr|I1KWS2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G59020.1 |
761 |
63.6 |
77.9 |
| Symbols: | ARM repeat superfamily protein | chr3:21810973-21817418 REVERSE LENGTH=1029 |
| Medicago |
Medtr7g021500.2 |
865 |
72.0 |
84.3 |
| importin-like protein | HC | chr7:6806438-6819834 | 20130731 |
| Soybean |
Glyma08g29030.1 |
871 |
72.5 |
83.9 |
|
| LJGI |
gnl|LJGI|FS321710 |
702 |
100.0 |
100.0 |
similar to UniRef100_A7Q9N9 Cluster: Chromosome chr5 scaffold_67, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr5 scaffold_67, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0313719.3 |
length: 581 aa. |
| IPR011989 |
Armadillo-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
2e-47 |
8-573 |
| IPR013713 |
Exportin/Importin, Cse1-like |
| Biological Process |
GO:0006886 |
intracellular protein transport |
|
|
| HMMPfam |
PF08506 |
Cse1 |
2.1e-07 |
123-372 |
| IPR016024 |
Armadillo-type fold |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
4.5e-63 |
7-581 |
| no_ID |
|
| HMMPanther |
PTHR10997 |
IMPORTIN-7, |
4e-182 |
4-581 |
| HMMPanther |
PTHR10997:SF18 |
IMPORTIN |
4e-182 |
4-581 |
- Wolf-PSORT
Lj0g3v0313719.3 cyto 4, nucl 3, chlo 2, cyto_pero 2, plas 1.5, chlo_mito 1.5, cysk_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0313719.3 |
|