database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | --No_Hits-- | ||||
TAIR_pep | --No_Hits-- | ||||
Medicago | --No_Hits-- | ||||
Soybean | --No_Hits-- | ||||
LJGI | gnl|LJGI|BW626410 | 95.6 | 81.7 | 81.7 |
Lj0g3v0313449.1 | length: 206 aa. | |||
IPR000504 | RNA recognition motif domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003676 | nucleic acid binding | ||
HMMPfam | PF00076 | RRM_1 | 2.6e-10 | 85-154 |
HMMSmart | SM00360 | RNA | 0.00037 | 84-157 |
ProfileScan | PS50102 | RRM | 12.424 | 83-154 |
IPR012677 | Nucleotide-binding, alpha-beta plait | |||
Molecular Function | GO:0000166 | nucleotide binding | ||
Gene3D | G3DSA:3.30.70.330 | no description | 7.2e-11 | 82-154 |
no_ID | ||||
Seg | seg | seg | NA | 16-43 51-63 169-183 |
superfamily | SSF54928 | RNA-binding | 1e-12 | 83-160 |
Lj0g3v0313449.1 golg 4, chlo 2, nucl 2, cyto 2, plas 2, cyto_nucl 2, nucl_plas 2, cyto_plas 2
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj0g3v0313449.1 |