Miyakogusa Predicted Gene

Lj0g3v0312999.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1MF30_SOYBN 66.2 69.4 71.4 (tr|I1MF30) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=2

TAIR_pep --No_Hits--

Medicago Medtr2g019350.1 59.3 68.2 72.7 | PPR containing plant-like protein | HC | chr2:6301271-6304315 | 20130731

Soybean Glyma13g28980.1 85.5 45.4 51.5

LJGI gnl|LJGI|BP038410 230 92.9 92.9 weakly similar to UniRef100_A7QEG3 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)

Putative transmembrane regions

From To

TM segments
SOSUI 42 64

90 112

Wolf-PSORT

Lj0g3v0312999.1 chlo 8, nucl 2, cyto 1, mito 1, extr 1, E.R. 1, cysk_nucl 1, nucl_plas 1, cyto_E.R. 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0312999.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1MF30_SOYBN	66.2	69.4	71.4	(tr\|I1MF30) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=2
TAIR_pep	--No_Hits--
Medicago	Medtr2g019350.1	59.3	68.2	72.7	\| PPR containing plant-like protein \| HC \| chr2:6301271-6304315 \| 20130731
Soybean	Glyma13g28980.1	85.5	45.4	51.5
LJGI	gnl\|LJGI\|BP038410	230	92.9	92.9	weakly similar to UniRef100_A7QEG3 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)