Miyakogusa Predicted Gene

Lj0g3v0312029.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MI74_SOYBN 385 78.5 84.8 (tr|I1MI74) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G53720.1 353 72.6 80.6 | Symbols: ATCYP59, CYP59 | cyclophilin 59 | chr1:20057012-20059508 FORWARD LENGTH=506
Medicago Medtr8g442420.1 384 78.5 84.0 | peptidyl-prolyl cis-trans isomerase-like protein | HC | chr8:16036627-16029239 | 20130731
Soybean Glyma15g28380.1 385 78.5 84.8  
LJGI gnl|LJGI|AV415981 488 95.6 95.6 homologue to UniRef100_A7QD90 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl cis-trans isomerase - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0312029.1 length: 237 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.7e-15 150-220
HMMSmart SM00360 RNA 1.1e-19 149-222
ProfileScan PS50102 RRM 15.767 148-226
IPR002130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain
Molecular Function GO:0003755 peptidyl-prolyl cis-trans isomerase activity    
Biological Process GO:0006457 protein folding    
HMMPfam PF00160 Pro_isomerase 1.8e-14 1-64
ProfileScan PS50072 CSA_PPIASE_2 13.595 1-66
superfamily SSF50891 Cyclophilin-like 2.2e-21 1-90
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 4.3e-24 140-226
no_ID  
Gene3D G3DSA:2.40.100.10 no description 3.3e-23 1-76
HMMPanther PTHR11071 PEPTIDYL-PROLYL 1.3e-138 1-231
HMMPanther PTHR11071:SF156PEPTIDYL-PROLYL CIS-TRANS 1.3e-138 1-231
Seg seg seg NA 30-40
92-105
superfamily SSF54928 RNA-binding 2.3e-23 135-226
Wolf-PSORT
Lj0g3v0312029.1	extr 4, pero 4, cyto 2, cysk 2, chlo 1, cyto_nucl 1, cysk_nucl 1, mito_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0312029.1