Miyakogusa Predicted Gene

Lj0g3v0311359.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K8F2_MEDTR 661 65.5 78.0 (tr|G7K8F2) Cc-nbs-lrr resistance protein OS=Medicago truncatula GN=MTR_5g092190 PE=4 SV=1
TAIR_pep AT1G72930.1 139 48.3 62.6 | Symbols: TIR | toll/interleukin-1 receptor-like | chr1:27439476-27440147 FORWARD LENGTH=176
Medicago Medtr5g092190.1 614 66.1 78.2 | disease resistance protein (TIR-NBS-LRR class) | LC | chr5:40265309-40256638 | 20130731
Soybean Glyma02g45970.1 221 63.3 74.0  
LJGI gnl|LJGI|DC599828 1055 99.6 99.6 weakly similar to UniRef100_A7PQ23 Cluster: Chromosome chr18 scaffold_24, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_24, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0311359.1 length: 543 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 3.4e-33 371-501
HMMSmart SM00255 Toll 2.5e-39 367-507
ProfileScan PS50104 TIR 28.469 366-507
superfamily SSF52200 Toll/Interleukin 9.2e-40 356-510
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 2e-06 168-183
242-256
333-347
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 2.2e-35 155-366
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5e-24 126-370
no_ID  
Coil coil coiled-coil NA 64-92
Gene3D G3DSA:3.40.50.10140 no description 2.3e-24 365-498
Gene3D G3DSA:3.40.50.300 no description 2.6e-09 151-263
HMMPanther PTHR11017 LEUCINE-RICH 1.1e-44 260-526
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.1e-44 260-526
Seg seg seg NA 5-20
27-34
72-86
312-321
Wolf-PSORT
Lj0g3v0311359.1	nucl 5, cyto 3, chlo 2, plas 2, vacu 1, golg 1, chlo_mito 1, cysk_plas 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0311359.1