| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JDG4_SOYBN | 1311 | 82.0 | 87.0 | (tr|I1JDG4) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT1G76950.1 | 1139 | 71.9 | 81.4 | | Symbols: PRAF1 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr1:28906952-28911325 FORWARD LENGTH=1103 |
| Medicago | Medtr6g034795.1 | 1284 | 80.0 | 86.8 | | chromosome condensation regulator RCC1 repeat protein | HC | chr6:12109737-12119303 | 20130731 |
| Soybean | Glyma20g30530.1 | 1279 | 80.8 | 87.4 | |
| LJGI | gnl|LJGI|FS324848 | 1203 | 100.0 | 100.0 | similar to UniRef100_A7QMY3 Cluster: Chromosome undetermined scaffold_129, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_129, whole genome shotgun sequence - Vitis vinifera (Grape), partial (96%) |
| Lj0g3v0311279.3 | length: 823 aa. | |||
| IPR000306 | Zinc finger, FYVE-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0046872 | metal ion binding | ||
| HMMPfam | PF01363 | FYVE | 2.7e-14 | 623-689 |
| HMMSmart | SM00064 | Protein | 1.1e-18 | 621-690 |
| IPR000408 | Regulator of chromosome condensation, RCC1 | |||
| FPrintScan | PR00633 | RCCNDNSATION | 2.1e-14 | 299-315 349-365 390-406 406-420 508-526 566-587 |
| HMMPfam | PF00415 | RCC1 | 4.2e-15 | 297-345 349-400 403-452 466-513 518-567 572-619 |
| PatternScan | PS00626 | RCC1_2 | NA | 390-400 442-452 |
| ProfileScan | PS50012 | RCC1_3 | 14.886 | 297-348 349-403 404-455 467-518 519-570 571-622 |
| IPR009091 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | |||
| Gene3D | G3DSA:2.130.10.30 | no description | 7.6e-99 | 236-623 |
| superfamily | SSF50985 | RCC1/BLIP-II | 5.9e-99 | 236-626 |
| IPR011011 | Zinc finger, FYVE/PHD-type | |||
| superfamily | SSF57903 | FYVE/PHD | 1.1e-18 | 622-712 |
| IPR011993 | Pleckstrin homology-like domain | |||
| Gene3D | G3DSA:2.30.29.30 | no description | 5.3e-37 | 11-127 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 2.3e-15 | 624-696 |
| IPR017455 | Zinc finger, FYVE-related | |||
| ProfileScan | PS50178 | ZF_FYVE | 11.308 | 627-689 |
| no_ID | ||||
| HMMPanther | PTHR22870 | REGULATOR | 0 | 30-795 |
| HMMPanther | PTHR22870:SF91 | RCC1-LIKE | 0 | 30-795 |
| Seg | seg | seg | NA | 146-169 215-227 355-369 779-796 |
| superfamily | SSF50729 | PH | 6.5e-25 | 11-124 |
| From | To | |
|---|---|---|
| TM segments SOSUI |
386 | 408 |
| 436 | 458 |
Lj0g3v0311279.3 nucl 6, cyto 3, E.R. 3, cysk_nucl 3, nucl_plas 3, cyto_E.R. 3
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0311279.3 |