Miyakogusa Predicted Gene
- Lj0g3v0311259.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7L074_MEDTR |
118 |
36.7 |
51.0 |
(tr|G7L074) F-box/kelch-repeat protein OS=Medicago truncatula GN=MTR_7g055870 PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr7g055930.1 |
118 |
36.7 |
50.6 |
| F-box protein interaction domain protein | LC | chr7:18953942-18952662 | 20130731 |
| Soybean |
Glyma08g46490.1 |
99.4 |
34.2 |
48.3 |
|
| LJGI |
gnl|LJGI|TC78617 |
200 |
84.2 |
84.2 |
similar to UniRef100_A2Q4Y0 Cluster: F-box protein interaction domain; n=1; Medicago truncatula|Rep: F-box protein interaction domain - Medicago truncatula (Barrel medic), partial (8%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0311259.3 |
length: 249 aa. |
| IPR006527 |
F-box associated domain, type 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07734 |
FBA_1 |
0.00015 |
95-219 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
4.7e-12 |
19-218 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
12-22 |
- Wolf-PSORT
Lj0g3v0311259.3 cyto 4, chlo 3, extr 3, cyto_nucl 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0311259.3 |
|