Miyakogusa Predicted Gene

Lj0g3v0311169.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1KHU0_SOYBN 68.6 86.8 92.1 (tr|I1KHU0) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G10810.1 50.1 62.9 77.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr4:6645986-6646231 REVERSE LENGTH=81

Medicago Medtr8g027380.1 67.8 81.6 92.1 | hypothetical protein | HC | chr8:9662164-9661291 | 20130731

Soybean Glyma07g06010.1 68.6 86.8 92.1

LJGI gnl|LJGI|TC75404 583 100.0 100.0 similar to UniRef100_A7QWG1 Cluster: Chromosome undetermined scaffold_203, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_203, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0311169.1 length: 97 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 3-15
54-70
80-93

Wolf-PSORT

Lj0g3v0311169.1 chlo 6, nucl 5, mito 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0311169.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1KHU0_SOYBN	68.6	86.8	92.1	(tr\|I1KHU0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G10810.1	50.1	62.9	77.1	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). \| chr4:6645986-6646231 REVERSE LENGTH=81
Medicago	Medtr8g027380.1	67.8	81.6	92.1	\| hypothetical protein \| HC \| chr8:9662164-9661291 \| 20130731
Soybean	Glyma07g06010.1	68.6	86.8	92.1
LJGI	gnl\|LJGI\|TC75404	583	100.0	100.0	similar to UniRef100_A7QWG1 Cluster: Chromosome undetermined scaffold_203, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_203, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)

no_ID
Lj0g3v0311169.1				length: 97 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	3-15 54-70 80-93