Miyakogusa Predicted Gene

Lj0g3v0310879.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7KCC8_SOYBN 157 64.7 83.2 (tr|K7KCC8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G45540.1 79.7 37.7 57.2 | Symbols: | WD-40 repeat family protein / beige-related | chr2:18757881-18772229 REVERSE LENGTH=2946

Medicago Medtr7g075660.1 143 55.3 78.0 | WD-40 repeat protein/beige protein | HC | chr7:28381508-28350580 | 20130731

Soybean --No_Hits--

LJGI gnl|LJGI|FS352866 733 100.0 100.0 similar to UniRef100_A3CMX0 Cluster: Sensor protein; n=1; Streptococcus sanguinis SK36|Rep: Sensor protein - Streptococcus sanguinis (strain SK36), partial (5%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0310879.1 length: 145 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 55-76

Wolf-PSORT

Lj0g3v0310879.1 nucl 9.5, cyto_nucl 7, cyto 3.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0310879.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7KCC8_SOYBN	157	64.7	83.2	(tr\|K7KCC8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G45540.1	79.7	37.7	57.2	\| Symbols: \| WD-40 repeat family protein / beige-related \| chr2:18757881-18772229 REVERSE LENGTH=2946
Medicago	Medtr7g075660.1	143	55.3	78.0	\| WD-40 repeat protein/beige protein \| HC \| chr7:28381508-28350580 \| 20130731
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|FS352866	733	100.0	100.0	similar to UniRef100_A3CMX0 Cluster: Sensor protein; n=1; Streptococcus sanguinis SK36\|Rep: Sensor protein - Streptococcus sanguinis (strain SK36), partial (5%)

no_ID
Lj0g3v0310879.1				length: 145 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	55-76