Miyakogusa Predicted Gene
- Lj0g3v0310419.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NDX9_SOYBN |
213 |
46.2 |
60.9 |
(tr|I1NDX9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G07040.1 |
84.3 |
30.5 |
50.2 |
| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926 |
| Medicago |
Medtr3g056585.1 |
226 |
48.5 |
62.6 |
| LRR and NB-ARC domain disease resistance protein | LC | chr3:22616366-22612832 | 20130731 |
| Soybean |
Glyma20g08290.1 |
213 |
46.2 |
60.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0310419.1 |
length: 318 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
1.7e-19 |
71-305 |
| HMMPanther |
PTHR23155 |
LEUCINE-RICH |
1.5e-34 |
11-305 |
| HMMPanther |
PTHR23155:SF94 |
CG2471-PA |
1.5e-34 |
11-305 |
| Seg |
seg |
seg |
NA |
294-308 |
| superfamily |
SSF52047 |
RNI-like |
8.9e-27 |
45-318 |
- Wolf-PSORT
Lj0g3v0310419.1 nucl 6, nucl_plas 5.5, plas 3, cyto 1, mito 1, extr 1, E.R. 1, pero 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0310419.1 |
|