Miyakogusa Predicted Gene

Lj0g3v0310349.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JKU2_SOYBN 850 64.0 70.9 (tr|I1JKU2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G00150.1 329 48.9 62.7 | Symbols: HAM3, ATHAM3, LOM3 | GRAS family transcription factor | chr4:57429-59105 REVERSE LENGTH=558
Medicago Medtr4g026485.1 616 73.7 82.2 | GRAS family transcription regulator | HC | chr4:9111815-9114789 | 20130731
Soybean Glyma03g03760.1 850 64.0 70.9  
LJGI gnl|LJGI|TC74075 1380 97.5 97.5 weakly similar to UniRef100_A7PYF4 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0310349.1 length: 696 aa.
IPR005202 Transcription factor GRAS
method AccNumber shortName E-value location
HMMPfam PF03514 GRAS 5.8e-85 368-695
ProfileScan PS50985 GRAS 37.062 312-675
no_ID  
HMMPanther PTHR31523 FAMILY 3e-142 6-696
HMMPanther PTHR31523:SF0 SUBFAMILY 3e-142 6-696
Seg seg seg NA 19-38
71-108
221-235
439-453
Wolf-PSORT
Lj0g3v0310349.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0310349.1