Miyakogusa Predicted Gene

Lj0g3v0309389.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7KW49_SOYBN 1994 68.6 78.7 (tr|K7KW49) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G07940.2 265 38.8 55.6 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G07980.1). | chr5:2534720-2540086 FORWARD LENGTH=1526

Medicago Medtr3g024330.1 1825 63.7 74.7 | dentin sialophosphoprotein-like protein, putative | HC | chr3:7511085-7503530 | 20130731

Soybean Glyma04g32570.1 1153 57.4 66.3

LJGI gnl|LJGI|TC81384 153 98.8 98.8 similar to UniRef100_A7PDC5 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0309389.1 length: 1552 aa.

no_ID

method AccNumber shortName E-value location

HMMPanther PTHR31267 FAMILY 1.9e-78 10-1522

Seg seg seg NA 955-960
1454-1466
1517-1528

Wolf-PSORT

Lj0g3v0309389.1 nucl 11.5, cyto_nucl 6.5, extr 1, cysk 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0309389.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7KW49_SOYBN	1994	68.6	78.7	(tr\|K7KW49) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G07940.2	265	38.8	55.6	\| Symbols: \| FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G07980.1). \| chr5:2534720-2540086 FORWARD LENGTH=1526
Medicago	Medtr3g024330.1	1825	63.7	74.7	\| dentin sialophosphoprotein-like protein, putative \| HC \| chr3:7511085-7503530 \| 20130731
Soybean	Glyma04g32570.1	1153	57.4	66.3
LJGI	gnl\|LJGI\|TC81384	153	98.8	98.8	similar to UniRef100_A7PDC5 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)

no_ID
Lj0g3v0309389.1				length: 1552 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR31267	FAMILY	1.9e-78	10-1522
Seg	seg	seg	NA	955-960 1454-1466 1517-1528