Miyakogusa Predicted Gene

Lj0g3v0308719.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MUL4_SOYBN 79.3 48.4 56.8 (tr|I1MUL4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G48440.1 60.8 48.4 62.5 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr3:17941402-17943576 FORWARD LENGTH=448
Medicago Medtr4g104260.1 74.7 44.3 55.7 | zinc finger C-x8-C-x5-C-x3-H type family protein | HC | chr4:43094920-43090696 | 20130731
Soybean Glyma17g13580.1 79.3 48.4 56.8  
LJGI gnl|LJGI|TC73218 83.8 93.1 93.1 similar to UniRef100_A7PCK0 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0308719.1 length: 190 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 1.7e-06 74-98
HMMPfam PF00642 zf-CCCH 4.6e-07 74-96
HMMSmart SM00356 zinc 19 71-98
132-156
ProfileScan PS50103 ZF_C3H1 6.399 71-99
51-67
132-153
no_ID  
HMMPanther PTHR12506 PROTEIN 1.4e-16 126-186
HMMPanther PTHR12506:SF11 ZINC 1.4e-16 126-186
Seg seg seg NA 45-56
125-137
superfamily SSF90229 CCCH 1.2e-06 67-100
Wolf-PSORT
Lj0g3v0308719.1	chlo 7, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0308719.1