Miyakogusa Predicted Gene

Lj0g3v0308609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LSR3_SOYBN 556 63.1 74.0 (tr|K7LSR3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G17680.2 235 38.8 58.6 | Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr1:6076388-6082160 FORWARD LENGTH=896
Medicago Medtr4g079390.1 506 57.7 71.1 | general transcription factor 3C-like protein | HC | chr4:30684330-30698647 | 20130731
Soybean Glyma12g03130.1 535 58.6 68.1  
LJGI gnl|LJGI|TC80003 319 99.4 99.4 weakly similar to UniRef100_Q56PC1 Cluster: RPGR; n=1; Callithrix jacchus|Rep: RPGR - Callithrix jacchus (Common marmoset), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0308609.1 length: 482 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.5e-09 136-353
354-465
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 37.994 129-475
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.013 302-328
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF13181 TPR_8 0.16 409-436
HMMSmart SM00028 Tetratricopeptide 11 129-162
163-196
231-264
301-334
408-441
ProfileScan PS50005 TPR 7.906 129-162
163-196
197-230
231-264
265-298
301-334
408-441
no_ID  
Coil coil coiled-coil NA 22-50
64-85
HMMPanther PTHR23082 TRANSCRIPTION 3.6e-73 5-472
HMMPfam PF13371 TPR_9 0.0012 225-272
HMMPfam PF13414 TPR_11 2.3e-07 137-194
Seg seg seg NA 15-51
113-124
superfamily SSF48452 TPR-like 1.3e-23 131-465
Wolf-PSORT
Lj0g3v0308609.1	nucl 12, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0308609.1