Miyakogusa Predicted Gene

Lj0g3v0308479.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1LNY1_SOYBN 810 85.5 91.8 (tr|I1LNY1) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G30700.1 584 66.3 77.8 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13082033-13084384 REVERSE LENGTH=480

Medicago Medtr0221s0020.2 739 78.0 87.0 | transmembrane protein, putative | HC | scaffold0221:2098-8119 | 20130731

Soybean Glyma12g01200.1 810 85.5 91.8

LJGI gnl|LJGI|TC61929 1294 100.0 100.0 similar to UniRef100_A7QAM6 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)

Putative transmembrane regions

From To

TM segments
SOSUI 7 29

449 471

Wolf-PSORT

Lj0g3v0308479.1 chlo 3, extr 3, vacu 3, golg 2, E.R._vacu 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0308479.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1LNY1_SOYBN	810	85.5	91.8	(tr\|I1LNY1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G30700.1	584	66.3	77.8	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr2:13082033-13084384 REVERSE LENGTH=480
Medicago	Medtr0221s0020.2	739	78.0	87.0	\| transmembrane protein, putative \| HC \| scaffold0221:2098-8119 \| 20130731
Soybean	Glyma12g01200.1	810	85.5	91.8
LJGI	gnl\|LJGI\|TC61929	1294	100.0	100.0	similar to UniRef100_A7QAM6 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)