Miyakogusa Predicted Gene

Lj0g3v0308169.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SYF4_LOTJA 141 100.0 100.0 (tr|I3SYF4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT4G28740.1 123 90.3 93.5 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:14201051-14202542 FORWARD LENGTH=347

Medicago Medtr1g069240.1 129 93.5 98.4 | plant/F16A16-150 protein, putative | HC | chr1:29822607-29820040 | 20130731

Soybean Glyma13g19160.1 125 93.5 95.2

LJGI gnl|LJGI|TC76989 841 99.5 99.5 homologue to UniRef100_A7Q1G1 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0308169.1 length: 143 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 68-81

Wolf-PSORT

Lj0g3v0308169.1 chlo 10, nucl 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0308169.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SYF4_LOTJA	141	100.0	100.0	(tr\|I3SYF4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT4G28740.1	123	90.3	93.5	\| Symbols: \| FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr4:14201051-14202542 FORWARD LENGTH=347
Medicago	Medtr1g069240.1	129	93.5	98.4	\| plant/F16A16-150 protein, putative \| HC \| chr1:29822607-29820040 \| 20130731
Soybean	Glyma13g19160.1	125	93.5	95.2
LJGI	gnl\|LJGI\|TC76989	841	99.5	99.5	homologue to UniRef100_A7Q1G1 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)

no_ID
Lj0g3v0308169.1				length: 143 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	68-81