Miyakogusa Predicted Gene
- Lj0g3v0307699.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N589_SOYBN |
290 |
66.2 |
80.7 |
(tr|K7N589) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G09020.1 |
233 |
56.1 |
71.0 |
| Symbols: SNF4, ATSNF4 | homolog of yeast sucrose nonfermenting 4 | chr1:2900149-2904212 REVERSE LENGTH=487 |
| Medicago |
Medtr7g113330.1 |
272 |
66.7 |
78.8 |
| sucrose nonfermenting-like protein | HC | chr7:46661673-46668826 | 20130731 |
| Soybean |
Glyma20g37840.1 |
290 |
66.5 |
81.1 |
|
| LJGI |
gnl|LJGI|TC75388 |
252 |
80.6 |
80.6 |
similar to UniRef100_Q84PE0 Cluster: AKIN betagamma; n=1; Medicago truncatula|Rep: AKIN betagamma - Medicago truncatula (Barrel medic), partial (88%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0307699.1 |
length: 210 aa. |
| IPR000644 |
Cystathionine beta-synthase, core |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| ProfileScan |
PS51371 |
CBS |
9.124 |
114-178 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.580.10 |
no description |
3.2e-05 |
120-178 |
| HMMPanther |
PTHR13780 |
AMP-ACTIVATED |
2.6e-24 |
102-193 |
| HMMPanther |
PTHR13780:SF13 |
SUBFAMILY |
2.6e-24 |
102-193 |
- Wolf-PSORT
Lj0g3v0307699.1 nucl 7, cyto 2, chlo 1, mito 1, plas 1, extr 1, cysk 1, chlo_mito 1, cyto_pero 1, cysk_plas 1, mito_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0307699.1 |
|