Miyakogusa Predicted Gene
- Lj0g3v0307519.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KVT6_MEDTR |
159 |
85.4 |
92.1 |
(tr|G7KVT6) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_7g050300 PE=4 SV=1 |
| TAIR_pep |
AT4G10090.1 |
105 |
54.7 |
77.9 |
| Symbols: ELP6 | elongator protein 6 | chr4:6305455-6307286 FORWARD LENGTH=262 |
| Medicago |
Medtr7g451710.1 |
163 |
85.4 |
92.1 |
| paxneb protein | HC | chr7:17603010-17596561 | 20130731 |
| Soybean |
Glyma08g45450.1 |
143 |
77.8 |
87.8 |
|
| LJGI |
gnl|LJGI|TC58243 |
420 |
95.1 |
95.1 |
similar to UniRef100_A7Q403 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0307519.1 |
length: 89 aa. |
| IPR018627 |
Uncharacterised protein family UPF0405 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF09807 |
DUF2348 |
2e-19 |
6-89 |
| no_ID |
|
| HMMPanther |
PTHR16184 |
FAMILY |
2e-32 |
3-89 |
| HMMPanther |
PTHR16184:SF1 |
SUBFAMILY |
2e-32 |
3-89 |
- Wolf-PSORT
Lj0g3v0307519.1 cyto 8.5, cyto_E.R. 5, chlo 1, nucl 1, mito 1, cysk 1, golg 1, chlo_mito 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0307519.1 |
|